Detailed information of matrix profile MA0868.2

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Profile summary
Name: SOX8
Matrix ID: MA0868.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 17599239
Uniprot ID: P57073  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 193 287 1827 36 16 70 45 222 571 724 ]
C [ 912 1827 20 0 0 35 0 263 1827 854 ]
G [ 421 208 36 43 0 1827 0 151 414 1124 ]
T [ 300 1356 273 1827 1827 3 1827 1827 740 1827 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0868.1 MA0868 1 SOX8 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA0868.2 MA0868 2 SOX8 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
MA0868.3 MA0868 3 SOX8 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: