Detailed information of matrix profile MA0909.3

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Profile summary
Name: Hoxd13
Matrix ID: MA0909.3
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 18585359
Uniprot ID: P70217  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1288 667 15 11 5972 30 49 61 1111 1441 ]
C [ 1107 379 2 7 3 11 148 34 1716 1457 ]
G [ 1105 704 37 4 2 13 5 5866 1778 1323 ]
T [ 2477 4227 5923 5955 0 5923 5775 16 1372 1756 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0909.1 MA0909 1 HOXD13 Homo sapiens
HOX Homeo domain factors
MA0909.2 MA0909 2 HOXD13 Homo sapiens
HOX Homeo domain factors
MA0909.3 MA0909 3 Hoxd13 Mus musculus
HOX Homeo domain factors
MA0909.4 MA0909 4 Hoxd13 Mus musculus
HOX Homeo domain factors
     

-log(P-value) = 447.574

TFFM details

TFFM ID: TFFM0808.1

ChIP-seq Centrality
-log(P-value): 4198.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0808.1

ChIP-seq Centrality
-log(P-value): 3545.2

TFFM detailed summary logos

Description:

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Consensus:

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GC Content: