Detailed information of matrix profile MA1099.2

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Profile summary
Name: HES1
Matrix ID: MA1099.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15870295
Uniprot ID: Q14469  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 3216 4837 53 18526 0 791 232 18 8007 4239 ]
C [ 6013 6360 18526 0 18526 0 9081 0 18526 18526 ]
G [ 12513 6203 0 4057 0 18526 0 18526 2072 3492 ]
T [ 2742 1126 1 253 21 0 9446 464 5858 3321 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1099.1 MA1099 1 Hes1 Mus musculus
Hairy-related factors Basic helix-loop-helix factors (bHLH)
MA1099.2 MA1099 2 HES1 Homo sapiens
Hairy-related factors Basic helix-loop-helix factors (bHLH)
MA1099.3 MA1099 3 HES1 Homo sapiens
Hairy-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0826.1

ChIP-seq Centrality
-log(P-value): 437.588

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0826.1

ChIP-seq Centrality
-log(P-value): 427.517

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: