Detailed information of matrix profile MA1113.2

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Profile summary
Name: PBX2
Matrix ID: MA1113.2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 12054735
Uniprot ID: P40425  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 9039 11594 2451 2849 28112 1014 1434 2145 28466 637 3441 9383 5745 ]
C [ 5574 3952 352 555 327 569 343 817 317 1710 1585 3047 9625 ]
G [ 7086 7057 848 23894 453 754 574 2266 588 629 19645 8859 5863 ]
T [ 7897 6993 25945 2298 704 27259 27245 24368 225 26620 4925 8307 8363 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1113.1 MA1113 1 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.2 MA1113 2 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.3 MA1113 3 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     

-log(P-value) = 1415.15

TFFM details

TFFM ID: TFFM0146.2

ChIP-seq Centrality
-log(P-value): 11798.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0146.2

ChIP-seq Centrality
-log(P-value): 10842.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: