Detailed information of matrix profile MA1146.2

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Profile summary
Name: NR1H4::RXRA
Matrix ID: MA1146.2
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 10744760
Uniprot ID: P19793   Q96RI1  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 521 51 83 48 37 838 660 17 100 826 324 19 11 ]
C [ 71 38 9 78 753 48 75 249 13 101 646 937 280 ]
G [ 383 798 773 112 102 92 121 13 875 49 9 15 55 ]
T [ 25 113 134 763 108 23 144 720 11 24 22 29 653 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1146.1 MA1146 1 NR1H4::RXRA Homo sapiens
Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
MA1146.2 MA1146 2 NR1H4::RXRA Homo sapiens
Thyroid hormone receptor-related factors (NR1)::RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: