Detailed information of matrix profile MA1252.2

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Profile summary
Name: ERF086
Matrix ID: MA1252.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q6J9Q2  
Source: 27203113
Comment: Also known as PUCHI

Sequence logo

Frequency matrix

         
A [ 199 6 0 9 1 0 20 163 42 126 ]
C [ 11 459 0 1 469 0 61 256 0 37 ]
G [ 260 0 475 466 0 477 397 0 397 254 ]
T [ 8 13 3 2 8 1 0 59 39 61 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1252.1 MA1252 1 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1252.2 MA1252 2 ERF086 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: