Detailed information of matrix profile MA1272.2

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Profile summary
Name: DOF2.2
Matrix ID: MA1272.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 10758479
Uniprot ID: Q9ZV33  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 357 203 1086 1077 1086 1084 1086 0 263 460 ]
C [ 142 278 0 0 0 0 0 0 154 112 ]
G [ 190 255 0 0 0 0 0 1086 208 195 ]
T [ 397 350 0 9 0 2 0 0 461 319 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1272.1 MA1272 1 DOF2.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1272.2 MA1272 2 DOF2.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1272.3 MA1272 3 DOF2.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     

-log(P-value) = 233.958

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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