Detailed information of matrix profile MA1371.2

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Profile summary
Name: IDD4
Matrix ID: MA1371.2
Class: C2H2 zinc finger factors
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8GYC1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 150 84 6 0 0 0 1 0 26 4 14 81 147 42 17 ]
C [ 61 35 23 7 6 0 0 575 78 16 78 0 14 242 140 ]
G [ 71 24 15 3 0 591 10 0 301 42 29 0 0 250 5 ]
T [ 309 448 547 581 585 0 580 16 186 529 470 510 430 57 429 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1371.1 MA1371 1 IDD4 Arabidopsis thaliana
C2H2 zinc finger factors
MA1371.2 MA1371 2 IDD4 Arabidopsis thaliana
IDD C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: