Detailed information of matrix profile MA1443.1

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Profile summary
Name: unc-30
Matrix ID: MA1443.1
Class: Homeo domain factors
Family:
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis briggsae
Data Type: PBM
Validation: 15723795
Uniprot ID: A8WQQ9  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 277 74 0 999 0 0 983 377 ]
C [ 194 0 0 0 0 0 0 155 ]
G [ 305 869 983 0 0 0 0 200 ]
T [ 222 55 16 0 999 999 16 266 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1443.1 MA1443 1 unc-30 Caenorhabditis briggsae
Homeo domain factors
MA1443.2 MA1443 2 unc-30 Caenorhabditis briggsae
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0614.1

ChIP-seq Centrality
-log(P-value): 216.897

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0614.1

ChIP-seq Centrality
-log(P-value): 212.021

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: