Detailed information of matrix profile MA1524.2

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Profile summary
Name: Msgn1
Matrix ID: MA1524.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 21750544
Uniprot ID: Q9JK54  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 137 123 120 315 17 8 515 1 22 2 1 5 4 86 95 87 ]
C [ 125 152 205 50 512 531 3 0 52 0 2 46 324 208 217 182 ]
G [ 158 117 113 140 8 2 6 4 8 3 539 128 21 40 92 96 ]
T [ 122 150 104 37 5 1 18 537 460 537 0 363 193 208 138 177 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1524.1 MA1524 1 MSGN1 Homo sapiens
Tal-related Basic helix-loop-helix factors (bHLH)
MA1524.2 MA1524 2 Msgn1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
MA1524.3 MA1524 3 Msgn1 Mus musculus
Tal-related Basic helix-loop-helix factors (bHLH)
     

-log(P-value) = 629.153

TFFM details

TFFM ID: TFFM0862.1

ChIP-seq Centrality
-log(P-value): 743.477

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0862.1

ChIP-seq Centrality
-log(P-value): 757.204

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: