Detailed information of matrix profile MA1647.2

  1. Home
  2. Matrix > MA1647.2

Profile summary
Name: Prdm4
Matrix ID: MA1647.2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 23918801
Uniprot ID: Q80V63  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 229 424 494 112 485 10 5 4 7 6 739 1107 36 140 249 229 214 ]
C [ 321 92 103 715 39 8 9 27 7 1141 203 13 14 76 437 369 483 ]
G [ 225 528 439 184 434 1147 6 10 12 4 37 40 1098 745 275 191 168 ]
T [ 406 137 145 170 223 16 1161 1140 1155 30 202 21 33 220 220 392 316 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1647.1 MA1647 1 PRDM4 Homo sapiens
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA1647.2 MA1647 2 Prdm4 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
MA1647.3 MA1647 3 Prdm4 Mus musculus
Factors with multiple dispersed zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 690.0

TFFM details

TFFM ID: TFFM0898.1

ChIP-seq Centrality
-log(P-value): 1764.39

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0898.1

ChIP-seq Centrality
-log(P-value): 1826.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: