Detailed information of matrix profile MA1676.2

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Profile summary
Name: NAC062
Matrix ID: MA1676.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 24914054
Uniprot ID: Q9SCK6  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 179 164 169 20 23 445 5 11 3 426 282 78 172 180 ]
C [ 91 72 56 4 2 18 528 4 2 35 88 255 106 102 ]
G [ 76 157 203 2 8 26 3 5 2 58 76 78 127 108 ]
T [ 194 147 112 514 507 51 4 520 533 21 94 129 135 150 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1676.1 MA1676 1 NAC062 Arabidopsis thaliana
NAC GCM domain factors
MA1676.2 MA1676 2 NAC062 Arabidopsis thaliana
NAC GCM domain factors
MA1676.3 MA1676 3 NAC062 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 364.837

TFFM details

TFFM ID: TFFM0905.1

ChIP-seq Centrality
-log(P-value): 1394.75

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0905.1

ChIP-seq Centrality
-log(P-value): 1359.48

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: