Detailed information of matrix profile MA1701.1

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Profile summary
Name: elt-2
Matrix ID: MA1701.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 7782329
Uniprot ID: Q10655  
Source: 29284660
Comment:

Sequence logo

Frequency matrix

         
A [ 646 545 2 3094 0 3103 3044 0 1812 1457 ]
C [ 906 297 1 0 0 0 16 1 421 373 ]
G [ 698 51 3068 10 0 0 35 3096 617 727 ]
T [ 856 2213 35 2 3106 3 11 9 256 549 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1701.1 MA1701 1 elt-2 Caenorhabditis elegans
C4-GATA-related Other C4 zinc finger-type factors
MA1701.2 MA1701 2 elt-2 Caenorhabditis elegans
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0663.1

ChIP-seq Centrality
-log(P-value): 374.846

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0663.1

ChIP-seq Centrality
-log(P-value): 385.958

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: