Detailed information of matrix profile MA1764.1

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Profile summary
Name: MYB116
Matrix ID: MA1764.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q94FU0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 157 198 55 266 0 0 14 1000 978 0 133 148 203 ]
C [ 268 309 154 2 1000 1000 0 0 22 910 108 172 184 ]
G [ 119 218 108 732 0 0 3 0 0 0 5 63 87 ]
T [ 456 275 684 0 0 0 983 0 0 90 754 616 526 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1764.1 MA1764 1 MYB116 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1764.2 MA1764 2 MYB116 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: