Detailed information of matrix profile MA1791.1

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Profile summary
Name: NAC087
Matrix ID: MA1791.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9FK44  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 148 417 537 19 0 0 212 198 320 282 323 654 17 990 670 0 238 607 965 ]
C [ 3 9 103 981 0 0 10 195 165 163 250 38 694 0 330 0 245 127 0 ]
G [ 2 176 283 0 722 0 777 40 308 315 195 136 158 2 0 997 143 16 0 ]
T [ 847 398 77 0 278 1000 0 567 207 240 231 172 130 9 0 3 374 250 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1791.1 MA1791 1 NAC087 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: