Detailed information of matrix profile MA1809.1

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Profile summary
Name: GLYMA-07G038400
Matrix ID: MA1809.1
Class: CH3
Family: GRF
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation: 29985961
Uniprot ID: I1KHB3  
Source: GSE152313
Comment:

Sequence logo

Frequency matrix

         
A [ 2514 2197 382 466 243 513 355 6663 171 2731 2122 ]
C [ 1555 1704 246 162 189 272 6779 127 260 1300 1378 ]
G [ 1676 1453 6694 315 6887 729 167 238 6804 1352 1964 ]
T [ 1788 2179 211 6590 214 6019 232 505 298 2150 2069 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1809.1 MA1809 1 GLYMA-07G038400 Glycine max
GRF CH3
MA1809.2 MA1809 2 GLYMA-07G038400 Glycine max
GRF C3H zinc finger factors
     

-log(P-value) = 46.3668

TFFM details

TFFM ID: TFFM0931.1

ChIP-seq Centrality
-log(P-value): 957.611

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0931.1

ChIP-seq Centrality
-log(P-value): 874.826

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: