Detailed information of matrix profile MA1828.1

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Profile summary
Name: Zm00001d038683
Matrix ID: MA1828.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: ChIP-seq
Validation: 18816164
Uniprot ID: C0HEC8  
Source: 33037196
Comment:

Sequence logo

Frequency matrix

         
A [ 359 350 135 17 12 10 138 9 24 1121 305 295 ]
C [ 604 540 197 65 42 9 85 1755 1746 265 569 492 ]
G [ 490 521 1406 50 1727 1768 111 28 18 189 550 654 ]
T [ 343 385 58 1664 15 9 1462 4 8 221 372 355 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1828.1 MA1828 1 Zm00001d038683 Zea mays
TCP Basic helix-loop-helix factors (bHLH)
MA1828.2 MA1828 2 Zm00001d038683 Zea mays
TCP
     

-log(P-value) = 355.33

TFFM first order profile doesn't exist for this profile.
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