Detailed information of matrix profile MA1859.2

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Profile summary
Name: FoxA-a
Matrix ID: MA1859.2
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 19820186
Uniprot ID: Q4H3J7  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 296 157 64 185 7 14 10 956 19 452 31 835 496 ]
C [ 70 73 50 6 9 12 10 10 935 43 177 23 52 ]
G [ 82 74 51 800 7 7 11 21 14 42 43 36 401 ]
T [ 552 696 835 10 977 966 969 14 31 463 749 106 51 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1859.1 MA1859 1 FoxA-a Ciona intestinalis
FOX Fork head/winged helix factors
MA1859.2 MA1859 2 FoxA-a Ciona intestinalis
FOX Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: