| Name: | Nkx3 |
| Matrix ID: | MA1905.1 |
| Class: | Homeo domain factors |
| Family: | NK |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q4H338 |
| Source: | 31267468 |
| Comment: |
| A [ | 280 | 285 | 269 | 268 | 268 | 225 | 203 | 792 | 874 | 32 | 31 | 892 | 735 | 217 | 239 | 290 | 266 | 276 | 298 | 308 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 241 | 243 | 242 | 254 | 253 | 265 | 278 | 100 | 42 | 31 | 42 | 23 | 97 | 246 | 226 | 221 | 245 | 240 | 227 | 217 | ] |
| G [ | 210 | 211 | 211 | 219 | 240 | 250 | 138 | 51 | 36 | 24 | 31 | 44 | 88 | 209 | 255 | 240 | 237 | 221 | 214 | 210 | ] |
| T [ | 270 | 261 | 278 | 260 | 239 | 260 | 380 | 57 | 48 | 913 | 896 | 41 | 80 | 328 | 280 | 249 | 251 | 262 | 261 | 265 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1905.1 | MA1905 | 1 | Nkx3 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
| MA1905.2 | MA1905 | 2 | Nkx3 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: