| Name: | Otp |
| Matrix ID: | MA1907.1 |
| Class: | Homeo domain factors |
| Family: | Paired-related HD factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | Q4H304 |
| Source: | 31267468 |
| Comment: |
| A [ | 316 | 332 | 494 | 471 | 283 | 179 | 221 | 895 | 883 | 16 | 13 | 867 | 717 | 309 | 179 | 336 | 481 | 430 | 369 | 326 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 142 | 90 | 106 | 133 | 142 | 203 | 139 | 34 | 19 | 16 | 22 | 17 | 59 | 153 | 135 | 135 | 130 | 140 | 139 | 110 | ] |
| G [ | 108 | 106 | 138 | 152 | 178 | 117 | 62 | 32 | 19 | 9 | 15 | 43 | 131 | 122 | 132 | 120 | 125 | 140 | 117 | 104 | ] |
| T [ | 434 | 472 | 262 | 244 | 396 | 501 | 578 | 39 | 79 | 959 | 950 | 74 | 93 | 415 | 553 | 409 | 264 | 290 | 375 | 460 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1907.1 | MA1907 | 1 | Otp |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
| MA1907.2 | MA1907 | 2 | Otp |
Ciona intestinalis
|
Paired-related HD factors | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: