Detailed information of matrix profile MA1932.1

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Profile summary
Name: ELK1::HOXB13
Matrix ID: MA1932.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 1160 960 286 1569 6511 462 2325 6142 0 368 0 298 0 41 143 449 ]
C [ 1472 709 507 387 354 5222 381 9 6677 82 117 6717 6731 51 880 1843 ]
G [ 1455 1025 407 126 331 76 2220 494 89 0 0 0 0 6721 5717 293 ]
T [ 2635 5771 6592 5884 87 2549 1795 76 340 6674 6744 0 0 145 171 4647 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1932.1 MA1932 1 ELK1::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
MA1932.2 MA1932 2 ELK1::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: