Detailed information of matrix profile MA1933.1

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Profile summary
Name: ELK1::SREBF2
Matrix ID: MA1933.1
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23050235
Uniprot ID: P19419   Q12772  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 186 45 973 5 113 10 82 973 0 204 31 34 0 59 50 290 ]
C [ 86 973 31 973 114 537 492 15 848 8 1 973 973 15 193 439 ]
G [ 37 48 127 68 973 10 481 30 2 11 10 12 17 973 779 53 ]
T [ 973 51 88 51 30 436 74 12 122 973 973 0 3 13 175 533 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1933.1 MA1933 1 ELK1::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
MA1933.2 MA1933 2 ELK1::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: