Detailed information of matrix profile MA1948.2

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Profile summary
Name: ETV5::HOXA2
Matrix ID: MA1948.2
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: O43364   P41161  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 30 345 345 9 19 345 3 137 13 0 3 30 ]
C [ 0 34 4 95 62 0 345 21 3 345 345 55 ]
G [ 15 95 31 17 144 89 24 35 8 0 0 345 ]
T [ 345 0 0 345 201 0 26 208 345 11 0 56 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1948.1 MA1948 1 ETV5::HOXA2 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
MA1948.2 MA1948 2 ETV5::HOXA2 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: