Detailed information of matrix profile MA1996.1

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Profile summary
Name: Nr1H2
Matrix ID: MA1996.1
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 31175293
Uniprot ID:  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2167 2342 37 269 8834 104 191 99 807 2421 2338 ]
C [ 2255 2224 241 72 41 8740 8521 132 2796 1858 2014 ]
G [ 2069 2757 51 8483 35 36 171 191 1340 2091 2733 ]
T [ 2480 1648 8642 147 61 91 88 8549 4028 2601 1886 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1996.1 MA1996 1 Nr1H2 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1996.2 MA1996 2 Nr1H2 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 59.7438

TFFM details

TFFM ID: TFFM0963.1

ChIP-seq Centrality
-log(P-value): 2755.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0963.1

ChIP-seq Centrality
-log(P-value): 2461.52

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: