Detailed information of matrix profile MA2146.1

Profile summary

Name: nhr-86
Matrix ID: MA2146.1
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 27777270
Uniprot ID: Q965W2  
Source: 25215497
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

A [ 3 2 2 2 993 2 2 3 ]
C [ 3 2 2 2 2 2 2 990 ]
G [ 661 2 993 2 2 993 2 3 ]
T [ 332 993 2 993 2 2 993 3 ]

Binding sites information

No Binding sites available for this model.

External links