Detailed information of matrix profile MA2171.1

Profile summary

Name: lsl-1
Matrix ID: MA2171.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 25905672
Uniprot ID: O02273  
Source: GTRD
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

A [ 173 409 109 9 1143 8 66 7 5 1072 169 ]
C [ 38 60 217 9 3 1127 74 5 6 30 111 ]
G [ 825 610 376 17 8 11 515 1148 12 43 765 ]
T [ 131 88 465 1132 13 21 512 7 1144 22 122 ]

Binding sites information

External links