Detailed information of matrix profile MA2183.1

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Profile summary
Name: nhr-33
Matrix ID: MA2183.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: yeast 1-hybrid
Validation: 28095401
Uniprot ID: G5ED47  
Source: 27777270
Comment:

Sequence logo

Frequency matrix

         
A [ 54 5 6 93 0 0 56 0 2 5 86 11 66 ]
C [ 5 51 0 0 6 0 0 0 5 2 0 53 6 ]
G [ 8 35 0 3 93 0 5 0 92 2 13 35 0 ]
T [ 32 8 93 3 0 100 38 100 0 90 0 0 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2183.1 MA2183 1 nhr-33 Caenorhabditis elegans
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: