Detailed information of matrix profile MA2344.1

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Profile summary
Name: REV
Matrix ID: MA2344.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 25395454
Uniprot ID: Q9SE43  
Source: GTRD
Comment:

Sequence logo

Frequency matrix

         
A [ 63 299 313 12 308 369 4 26 373 16 28 296 36 60 ]
C [ 26 22 18 8 17 0 3 17 4 9 4 21 41 36 ]
G [ 40 27 36 5 39 11 5 318 5 11 194 27 32 54 ]
T [ 256 37 18 360 21 5 373 24 3 349 159 41 276 235 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2344.1 MA2344 1 REV Arabidopsis thaliana
HD-ZIP Homeo domain factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1033.1

ChIP-seq Centrality
-log(P-value): 588.198

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1033.1

ChIP-seq Centrality
-log(P-value): 515.542

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: