Detailed information of matrix profile MA2398.1

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Profile summary
Name: AS2
Matrix ID: MA2398.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 17913740
Uniprot ID: O04479  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 75 116 4 4 63 66 289 321 166 161 148 123 52 11 6 77 173 ]
C [ 619 824 31 847 986 0 530 371 36 353 437 125 678 927 2 653 797 18 ]
G [ 41 22 626 148 4 813 116 118 232 50 22 250 41 0 936 302 36 726 ]
T [ 236 77 225 0 4 123 287 220 410 430 378 476 157 20 50 36 88 82 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2398.1 MA2398 1 AS2 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: