Detailed information of matrix profile UN0087.1

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This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

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Profile summary

Name: NCU01074
Matrix ID: UN0087.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: V5IM74  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 222 333 198 601 0 0 999 999 27 541 51 398 ]
C [ 222 222 310 299 111 0 0 0 27 402 637 200 ]
G [ 333 222 198 49 888 0 0 0 402 27 51 200 ]
T [ 222 222 291 49 0 999 0 0 541 27 260 200 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0087.1 UN0087 1 NCU01074 Neurospora crassa
Basic leucine zipper factors (bZIP)
UN0087.2 UN0087 2 NCU01074 Neurospora crassa
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: