Detailed information of matrix profile UN0108.1

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Profile summary

Name: Dsp1
Matrix ID: UN0108.1
Class: High-mobility group (HMG) domain factors
Family:
Collection: UNVALIDATED
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation:
Uniprot ID: Q24537  
Source: 30445619
Comment: Has a HMG-box DBD but likely to bind through other protein (Su(Hw))

Sequence logo

Frequency matrix

         
A [ 110 148 72 20 20 189 14 7 4 4 70 6 8 8 126 57 357 ]
C [ 262 491 183 915 739 404 16 1051 100 1047 83 993 10 1002 156 791 110 ]
G [ 232 202 415 60 67 428 21 4 9 6 758 12 7 9 398 136 217 ]
T [ 474 237 408 83 252 57 1027 16 965 21 167 67 1053 59 398 94 394 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0108.1 UN0108 1 Dsp1 Drosophila melanogaster
High-mobility group (HMG) domain factors
UN0108.2 UN0108 2 Dsp1 Drosophila melanogaster
TOX-related High-mobility group (HMG) domain factors
     

-log(P-value) = 478.727

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: