Detailed information of matrix profile UN0206.1

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Profile summary

Name: ZNF580
Matrix ID: UN0206.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9UK33  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 1124 2572 1138 0 98 1 3820 2988 443 1824 3364 11 0 236 3878 3789 0 3848 1 3888 3888 176 1632 ]
C [ 956 234 491 0 0 2 0 59 981 230 45 23 2 31 2 125 3889 0 0 0 0 1822 536 ]
G [ 647 870 1158 3888 3835 0 0 720 180 45 20 0 0 261 3 0 1 58 0 0 0 237 1302 ]
T [ 1161 449 1102 0 0 3888 87 273 2284 1872 469 3862 3888 3559 22 0 0 0 3888 1 3 1789 419 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0205.1 UN0205 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.1 UN0206 1 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0206.2 UN0206 2 ZNF580 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: