Detailed information of matrix profile UN0246.1

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Profile summary

Name: ZSCAN23
Matrix ID: UN0246.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q3MJ62  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 173 117 27 11 0 1119 1057 0 2 1119 0 1 1118 0 1100 29 95 670 254 ]
C [ 174 176 178 0 28 3 0 16 0 0 0 1119 1 1062 127 50 54 101 311 ]
G [ 158 246 88 1114 20 5 78 0 14 0 1100 0 1 27 0 39 983 323 330 ]
T [ 614 683 919 1 1085 14 0 1102 1118 0 33 0 0 34 7 1118 49 91 223 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0246.1 UN0246 1 ZSCAN23 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0246.2 UN0246 2 ZSCAN23 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: