Detailed information of matrix profile UN0248.1

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Profile summary

Name: ZSCAN5A
Matrix ID: UN0248.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9BUG6  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 4624 2897 6361 122 37 255 430 3043 482 2720 5852 1180 12 190 15143 4787 8498 2953 ]
C [ 2479 697 4818 3963 2 2638 17 4541 251 4003 1850 421 119 3772 1979 14535 2703 3580 ]
G [ 6934 10739 1395 348 15 502 15897 13989 15544 13734 9397 15475 15901 15082 1038 1345 6708 5661 ]
T [ 2073 4688 3536 15058 16091 15384 347 4463 2289 6699 2380 998 747 1670 2334 2792 4000 3916 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0248.1 UN0248 1 ZSCAN5A Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0248.2 UN0248 2 ZSCAN5A Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: