Detailed information of matrix profile UN0249.1

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Profile summary

Name: ZSCAN9
Matrix ID: UN0249.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O15535  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 3076 1523 1293 5573 116 0 12 2 0 11523 0 0 2 296 11446 0 0 2688 505 1654 ]
C [ 2231 1496 307 2686 64 2 11523 2 8 0 2 11523 3 3 12 2 11521 8112 3761 3706 ]
G [ 4570 2230 10443 2405 2 648 3 0 0 0 0 0 3 13 126 0 2 577 809 1268 ]
T [ 1645 8117 1285 859 11451 11291 0 11523 11517 1 11521 0 11520 11521 298 11523 0 1871 6979 4895 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0249.1 UN0249 1 ZSCAN9 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0249.2 UN0249 2 ZSCAN9 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: