Detailed information of matrix profile UN0386.1

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Profile summary

Name: AGL95
Matrix ID: UN0386.1
Class: MADS box factors
Family: M gamma
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q6DR69  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 603 37 945 911 103 244 141 37 13 50 763 13 913 724 229 ]
C [ 71 12 10 7 195 405 34 5 945 141 39 15 25 47 218 ]
G [ 247 934 25 22 556 215 15 17 18 74 176 955 22 104 393 ]
T [ 79 17 20 61 146 136 810 941 24 734 22 17 40 124 160 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0386.1 UN0386 1 AGL95 Arabidopsis thaliana
M gamma MADS box factors
UN0386.2 UN0386 2 AGL95 Arabidopsis thaliana
Type I MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: