Detailed information of matrix profile UN0456.1

  1. Home
  2. Matrix > UN0456.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: Mesp-Msgn
Matrix ID: UN0456.1
Class:
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 238 255 295 327 293 250 204 819 785 3 978 43 936 6 11 11 14 247 262 261 221 223 ]
C [ 246 218 229 179 197 159 124 7 142 986 4 11 4 17 4 70 183 425 330 249 272 244 ]
G [ 264 289 249 273 247 327 430 166 66 2 15 4 10 4 982 164 10 126 157 198 177 230 ]
T [ 252 237 227 222 263 265 242 7 7 9 3 942 50 973 3 755 793 202 252 292 330 303 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0456.1 UN0456 1 Mesp-Msgn Ciona intestinalis
UN0456.2 UN0456 2 Mesp-Msgn Ciona intestinalis
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: