Detailed information of matrix profile UN0457.1

  1. Home
  2. Matrix > UN0457.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: Nfil3-b
Matrix ID: UN0457.1
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 282 279 239 169 588 18 23 871 2 30 3 843 984 15 379 268 220 228 229 251 ]
C [ 235 228 254 157 48 19 21 3 943 3 143 137 3 352 291 241 270 248 266 286 ]
G [ 254 270 242 298 347 10 200 121 3 964 2 7 6 47 162 250 227 237 231 228 ]
T [ 229 223 265 376 17 953 756 5 52 2 852 13 7 586 169 241 283 286 273 236 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0457.1 UN0457 1 Nfil3-b Ciona intestinalis
CEBP-related Basic leucine zipper factors (bZIP)
UN0457.2 UN0457 2 Nfil3-b Ciona intestinalis
CEBP-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: