Detailed information of matrix profile UN0460.1

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Profile summary

Name: Osr1-2-b
Matrix ID: UN0460.1
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 304 157 187 257 267 173 254 78 3 10 889 13 10 220 156 246 392 179 246 193 ]
C [ 355 398 340 216 244 328 177 25 984 50 29 960 689 62 242 164 159 218 390 326 ]
G [ 151 243 234 270 274 202 211 889 5 4 18 20 9 573 389 200 249 370 221 240 ]
T [ 190 202 239 258 214 297 357 7 8 935 64 7 292 145 213 391 200 233 144 241 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0460.1 UN0460 1 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0460.2 UN0460 2 Osr1-2-b Ciona intestinalis
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: