Detailed information of matrix profile UN0472.1

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Profile summary

Name: xBP-a
Matrix ID: UN0472.1
Class: Basic leucine zipper factors (bZIP)
Family: XBP-1-related factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 297 388 388 243 175 363 194 28 978 5 6 3 43 131 143 201 292 290 308 303 ]
C [ 166 134 125 182 124 186 143 181 4 969 2 9 94 28 646 510 224 122 205 241 ]
G [ 223 173 217 248 553 326 69 635 8 8 989 3 853 336 71 142 112 107 158 176 ]
T [ 314 305 270 326 148 126 594 156 9 18 3 985 9 505 139 148 372 481 329 281 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0472.1 UN0472 1 xBP-a Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
UN0472.2 UN0472 2 xBP-a Ciona intestinalis
XBP-1-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: