Detailed information of matrix profile UN0476.1

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Profile summary

Name: ZF-C2H2-1
Matrix ID: UN0476.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2K9  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 259 263 169 168 186 86 126 97 123 50 982 8 12 387 365 354 28 764 146 134 ]
C [ 163 105 174 362 251 97 469 678 746 12 7 967 12 40 114 41 587 110 238 246 ]
G [ 325 432 368 127 269 401 265 99 77 4 7 21 3 362 99 341 61 37 98 78 ]
T [ 253 201 290 344 294 415 140 126 55 934 4 4 972 211 423 263 324 89 518 542 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0476.1 UN0476 1 ZF-C2H2-1 Ciona intestinalis
C2H2 zinc finger factors
UN0476.2 UN0476 2 ZF-C2H2-1 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: