Detailed information of matrix profile UN0486.1

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Profile summary

Name: CUX1::HOXA13
Matrix ID: UN0486.1
Class: Homeo domain factors::Homeo domain factors
Family: HD-CUT::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P31271   P39880  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 32 63 125 556 10 171 281 16 232 28 285 556 9 2 57 556 48 ]
C [ 20 16 35 16 251 108 39 221 44 15 6 19 0 505 0 0 6 ]
G [ 4 41 261 15 17 556 275 290 245 26 245 0 0 32 556 0 0 ]
T [ 556 556 556 1 305 163 22 29 35 487 20 7 556 52 10 0 556 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0486.1 UN0486 1 CUX1::HOXA13 Homo sapiens
HD-CUT::HOX Homeo domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: