Detailed information of matrix profile UN0499.1

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Profile summary

Name: ELK1::ONECUT2
Matrix ID: UN0499.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   P19419  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 122 134 760 55 43 25 785 30 27 117 9 37 25 9 5 4 9 78 ]
C [ 144 249 20 64 733 33 20 174 769 134 335 7 5 785 785 26 118 272 ]
G [ 278 183 31 15 38 781 15 35 25 439 448 4 4 11 2 776 610 92 ]
T [ 240 560 91 769 164 29 33 589 71 94 20 781 773 4 0 44 126 468 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0499.1 UN0499 1 ELK1::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0499.2 UN0499 2 ELK1::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: