Detailed information of matrix profile UN0518.1

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Profile summary

Name: ETV2::ONECUT2
Matrix ID: UN0518.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 272 1134 0 592 31 21 3 5 98 87 1708 9 55 33 1708 79 200 ]
C [ 560 310 1069 17 0 1708 1708 59 269 157 9 104 765 17 12 539 472 ]
G [ 381 574 120 158 21 0 8 1708 847 34 21 19 53 1708 22 34 210 ]
T [ 495 69 639 1708 1708 0 0 347 494 1708 71 1708 943 38 0 1169 826 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0518.1 UN0518 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0519.1 UN0519 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0518.2 UN0518 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0519.2 UN0519 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: