Detailed information of matrix profile UN0519.1

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Profile summary

Name: ETV2::ONECUT2
Matrix ID: UN0519.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95948   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 213 788 28 309 13 16 0 0 47 133 176 1364 99 19 10 1364 72 117 ]
C [ 642 79 926 16 0 1364 1364 43 339 238 268 13 61 874 0 0 230 508 ]
G [ 185 576 47 98 17 6 19 1364 725 131 97 25 19 32 1364 0 52 208 ]
T [ 325 94 438 1364 1364 1 1 227 254 863 823 27 1364 491 16 0 1134 857 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0518.1 UN0518 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0519.1 UN0519 1 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0518.2 UN0518 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
UN0519.2 UN0519 2 ETV2::ONECUT2 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: