Detailed information of matrix profile UN0562.2

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Profile summary

Name: HOXB2::PAX5
Matrix ID: UN0562.2
Class: Homeo domain factors::Paired box factors
Family: HOX::Paired domain only
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P14652   Q02548  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 6 153 886 886 2 45 493 243 6 0 157 11 125 886 94 ]
C [ 258 467 2 105 200 185 2 128 295 886 0 17 10 14 886 ]
G [ 315 13 178 195 3 886 361 220 886 1 886 3 886 127 7 ]
T [ 307 886 17 73 886 49 30 295 11 75 13 886 13 205 2 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0562.1 UN0562 1 HOXB2::PAX5 Homo sapiens
HOX::Paired domain only Homeo domain factors::Paired box factors
UN0562.2 UN0562 2 HOXB2::PAX5 Homo sapiens
HOX::Paired domain only Homeo domain factors::Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: