Detailed information of matrix profile UN0576.1

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Profile summary

Name: PITX1::TBX21
Matrix ID: UN0576.1
Class: Homeo domain factors::T-Box factors
Family: Paired-related HD factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78337   Q9UL17  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 12 398 396 6 1 6 14 39 3 69 196 8 400 0 68 13 ]
C [ 8 0 17 23 401 383 212 84 50 342 13 406 35 399 342 90 ]
G [ 0 4 0 0 0 2 27 13 0 38 127 0 73 0 15 4 ]
T [ 407 24 7 396 20 55 178 371 388 31 69 4 6 0 60 341 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0576.1 UN0576 1 PITX1::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: