Detailed information of matrix profile UN0586.1

  1. Home
  2. Matrix > UN0586.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: TEAD4::SPIB
Matrix ID: UN0586.1
Class: TEA domain factors::Tryptophan cluster factors
Family: TEF-1-related factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q01892   Q15561  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 464 1757 0 11 1 2 0 1 1 1757 119 36 90 225 ]
C [ 442 47 1757 2 0 1757 1757 211 1757 9 2 5 1757 1028 ]
G [ 258 146 365 1 1 1 0 1757 55 3 2 13 51 96 ]
T [ 593 58 26 1757 1757 1 11 458 21 191 1757 1757 533 729 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0586.1 UN0586 1 TEAD4::SPIB Homo sapiens
TEF-1-related factors::Ets-related TEA domain factors::Tryptophan cluster factors
UN0586.2 UN0586 2 TEAD4::SPIB Homo sapiens
TEF-1-related factors::Ets-related TEA domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: