Detailed information of matrix profile UN0724.1

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Profile summary

Name: zip-10
Matrix ID: UN0724.1
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q22835  
Source: 25905672
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to vertebrates

Sequence logo

Frequency matrix

         
A [ 164 69 999 0 69 930 999 244 ]
C [ 82 0 0 930 0 0 0 73 ]
G [ 82 0 0 0 930 0 0 73 ]
T [ 670 930 0 69 0 69 0 607 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0724.1 UN0724 1 zip-10 Caenorhabditis elegans
Fos-related Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: