Browse JASPAR CORE for six different taxonomic groups
JASPAR CORE & when should it be used?
The JASPAR CORE contains a curated, non-redundant set of profiles, derived from published and experimentally defined transcription factor binding sites for eukaryotes. It should be used, when seeking models for specific factors or structural classes, or if experimental evidence is paramount.
Profile Inference
Infer profile(s) given TF protein sequence
Matrix Align
Align to a custom matrix or IUPAC string
RESTful API
Access JASPAR database programmatically
Download
Batch download PFMs, TFFMs, sites, SQL etc